CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os10g0133400

Gene name
Homology with Arabidopsis Similar to At2g15830: unknown protein (HF=8e+0)

Module size 7 genes

NF 0.44

%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.71 89.6 0.99 Os10g0133400 9638.m00349 - - 8e+0 At2g15830 unknown protein O.I. H.G. S.X.
0.43 55.4 0.99 Os01g0845400 9629.m06194 - - 2e+0 At2g17442 unknown protein O.I. H.G. S.X.
0.43 55.4 0.99 Os03g0642600 9631.m04253 - - 5e-3 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) O.I. H.G. S.X.
0.42 53.9 0.99 Os01g0675400 9629.m04661 - - 6e-1 At5g59060 unknown protein O.I. H.G. S.X.
0.40 51.1 0.99 Os04g0516800 AK105554.1 - Conserved hypothetical protein 2e-1 At5g02570 histone H2B, putative O.I. H.G. S.X.
0.32 36.3 0.99 Os08g0250400 9636.m01523 - - 3e-1 At2g32130 - O.I. H.G. S.X.
0.30 32.7 0.99 Os07g0414700 NM_188168.1 - Protein of unknown function DUF707 family protein 1e-1 At5g18920 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
59.5 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.7 97.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.6 97.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.9 97.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.8 97.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.8 96.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8 96.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8 96.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8 96.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage