CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os10g0117200

Gene name
Homology with Arabidopsis Similar to At5g51451: unknown protein (HF=5e+0)

Module size 6 genes

NF 0.10

%ile 7.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.67 87.2 0.97 Os10g0117200 9638.m00184 - - 5e+0 At5g51451 unknown protein O.I. H.G. S.X.
0.47 62.3 0.97 Os06g0561100 CB622963 - - 8e-1 At3g44380 - O.I. H.G. S.X.
0.35 41.7 0.97 Os11g0291000 9639.m01728 - Beta-D-xylosidase 2e-2 At1g07730 - O.I. H.G. S.X.
0.27 27.5 0.97 Os01g0363600 NM_194015.1 - Hydroxyethylthiazole kinase, monofunctional familyprotein 7e+0 At5g02120 OHP (ONE HELIX PROTEIN) O.I. H.G. S.X.
0.07 3.7 0.97 Os02g0738300 AK108113.1 - Conserved hypothetical protein 1e-1 At4g14695 unknown protein O.I. H.G. S.X.
0.03 1.4 0.97 Os03g0636200 9631.m04195 - - 2e+0 At1g29060 - O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.4 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.5 98.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.1 98.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.8 98.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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