Co-expression analysis

Gene ID Os10g0116800
Gene name
Homology with ArabidopsisSimilar to At2g01890: PAP8 (PURPLE ACID PHOSPHATASE 8) (HF=6e-4)
Module size 6 genes
NF 0.36
%ile 41.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.83Os10g0116800AK110804.1-Purple acid phosphatase6e-4At2g01890PAP8 (PURPLE ACID PHOSPHATASE 8)O.I.H.G.S.X.
0.5068.00.86Os08g0372900AK102881.1-Annexin A7 (Annexin VII) (Synexin). Splice isoformShort3e+0At2g25250unknown proteinO.I.H.G.S.X.
0.4458.10.84Os06g0104900AK106504.1-L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B)(Fragment)3e+0At4g17260L-lactate dehydrogenase, putativeO.I.H.G.S.X.
0.4051.10.81Os02g05873009630.m03590-Hypothetical protein7e-1At3g63310glutamate bindingO.I.H.G.S.X.
0.1813.70.83Os06g0199000AK106381.1-Glycine-rich cell wall structural protein 2precursor1e-4At1g54215proline-rich family proteinO.I.H.G.S.X.
0.1712.60.82Os09g0471000AK103634.1-RmlC-like cupin family protein3e-1At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.799.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.099.2GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
20.899.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.299.1GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
13.498.5GSM159172Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
13.298.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.498.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0431GO:0006096The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.Link to AmiGO
0.0381GO:0006470The process of removing one or more phosphoric residues from a protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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