Co-expression analysis

Gene ID Os10g0106300
Gene name
Homology with ArabidopsisSimilar to At4g24050: short-chain dehydrogenase/reductase (SDR) family protein (HF=1e+1)
Module size 6 genes
NF 0.52
%ile 68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.98Os10g01063009638.m00073--1e+1At4g24050short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.7391.10.98Os01g0604600AU058134-Conserved hypothetical protein3e+0At3g48675unknown proteinO.I.H.G.S.X.
0.5371.30.98Os09g01160009637.m00121--4e+0At5g64040PSANO.I.H.G.S.X.
0.4458.10.98Os07g06884009638.m02651--2e+0At4g19270unknown proteinO.I.H.G.S.X.
0.4355.40.98Os01g09191009633.m03133--2e-1At3g48880F-box family proteinO.I.H.G.S.X.
0.3032.70.98Os02g0527700AK069409.1-Conserved hypothetical protein6e-1At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8094.60.96Os09g03470009637.m01522--3e-1At1g54680unknown proteinO.I.H.G.S.X.
0.5777.00.96Os02g0602100AK120479.1-PITSLRE serine/threonine-protein kinase CDC2L2 (EC2.7.1.37) (Galactosyltransferase associated proteinkinase p58/GTA) (Cell division cycle 2-like 2) (CDK11).Splice isoform SV74e-38At1g67580protein kinase family proteinO.I.H.G.S.X.
0.5777.00.98Os12g0566900AK107030.1-Conserved hypothetical protein3e-2At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.5068.00.96Os05g0501600AK100270.1-Leucine-rich repeat, typical subtype containingprotein4e-1At3g43930-O.I.H.G.S.X.
0.4762.30.96Os07g04389009635.m02468--9e-2At3g55250unknown proteinO.I.H.G.S.X.
0.4051.10.97Os04g0676900BI799758-Hypothetical protein4e+0At5g52780unknown proteinO.I.H.G.S.X.
0.3644.00.98Os04g0490000AK108365.1-Protoporphyrinogen oxidase-II2e+0At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)O.I.H.G.S.X.
0.3440.00.96Os10g0165000AK122169.1-Arabidopsis protein of unknown function DUF266family protein4e+0At5g66970GTP bindingO.I.H.G.S.X.
0.3440.00.97Os03g02791009631.m01676--2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.3134.50.97Os10g0328600AK109143.1--2e-2At5g44450methyltransferaseO.I.H.G.S.X.
0.3134.50.97Os07g02260509635.m01216--9e-1At3g23140zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2931.10.98Os01g0839000NM_190518.1--3e-1At2g26120glycine-rich proteinO.I.H.G.S.X.
0.2727.50.96Os12g02059009640.m00982--1e+0At2g36540NLI interacting factor (NIF) family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.698.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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