Co-expression analysis

Gene ID Os09g0570300
Gene name
Homology with ArabidopsisSimilar to At4g11410: short-chain dehydrogenase/reductase (SDR) family protein (HF=2e-4)
Module size 6 genes
NF 0.41
%ile 50.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.94Os09g0570300AK058687.1-Short-chain dehydrogenase Tic322e-4At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.6787.20.96Os08g0205200AK059439.1-Delayed-early response protein/equilibrativenucleoside transporter family protein8e+0At5g38317LCR58 (Low-molecular-weight cysteine-rich 58)O.I.H.G.S.X.
0.6181.20.95Os02g0803400AK107299.1-Vacuolar protein sorting 55 family protein3e+0At3g46020RNA-binding protein, putativeO.I.H.G.S.X.
0.2931.10.95Os03g0390700AK103600.1-Transthyretin family protein7e-7At5g58220TTL (Transthyretin-Like protein)O.I.H.G.S.X.
0.2219.40.96Os09g0372800AK112000.1-Protein kinase domain containing protein3e-9At5g08160ATPK3O.I.H.G.S.X.
0.2117.90.95Os05g0383000AK058345.1-TPR-like domain containing protein2e-3At3g57090BIGYINO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.197.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.596.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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