Co-expression analysis

Gene ID Os09g0559700
Gene name
Homology with ArabidopsisSimilar to At3g29300: unknown protein (HF=1e-1)
Module size 9 genes
NF 0.51
%ile 67.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.90.97Os09g05597009637.m03292--1e-1At3g29300unknown proteinO.I.H.G.S.X.
0.6382.70.97Os01g0578800AK111466.1-Conserved hypothetical protein3e+0At5g45860Bet v I allergen family proteinO.I.H.G.S.X.
0.5877.00.97Os06g03428259634.m02317--1e+0At4g36750quinone reductase family proteinO.I.H.G.S.X.
0.5676.30.97Os03g0734400CB966465-Ribosomal protein L7/L12 family protein2e+0At1g02710glycine-rich proteinO.I.H.G.S.X.
0.5371.30.97Os06g0298100AK108594.1-Conserved hypothetical protein7e+0At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.4863.70.97Os07g0214700NM_186511.1--4e+0At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.4458.10.98Os03g02188019631.m01113--8e-1At1g12064unknown proteinO.I.H.G.S.X.
0.3440.00.97Os09g03331009637.m01372--4e+0At4g30460glycine-rich proteinO.I.H.G.S.X.
0.3134.50.98Os09g02575009637.m00607--4e+0Atmg00770-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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