| Gene ID | Os09g0541900 |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g20200: EMB2719 (EMBRYO DEFECTIVE 2719) (HF=1e-24) |
| Module size | 6 genes |
| NF | 0.59 |
| %ile | 80.3 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 89.6 | 0.97 | Os09g0541900 | AB031299.1 | - | Proteasome component region PCI domain containingprotein | 1e-24 | At1g20200 | EMB2719 (EMBRYO DEFECTIVE 2719) | O.I. | H.G. | S.X. | |
| 0.73 | 91.1 | 0.98 | Os05g0301500 | AK067027.1 | - | Ribophorin I (Fragment) | 7e-5 | At1g76400 | ribophorin I family protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.98 | Os07g0209000 | AK058399.1 | - | Dolichyl-di-phosphooligosaccharide-proteinglycotransferase (Oligosaccharyltransferase)-like | 1e-24 | At5g66680 | DGL1 | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.98 | Os05g0147400 | AK062146.1 | - | T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1) | 6e-67 | At5g16070 | chaperonin, putative | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.98 | Os06g0538000 | AK069949.1 | - | Chaperonin Cpn60/TCP-1 family protein | 5e-83 | At5g26360 | chaperonin, putative | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | 0.97 | Os01g0911200 | AK101333.1 | - | Ribophorin II family protein | 1e-6 | At4g21150 | HAP6 (HAPLESS 6) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.9 | 98.7 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 8.2 | 97.7 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.7 | 97.6 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.5 | 97.5 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.4 | 97.5 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.5 | 97.2 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.3 | 97.2 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.3 | 97.2 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.3 | 97.2 | GSM377076 | Genomic DNA - 45 day old leaf sample - mutant g6485 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.2 | 97.1 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.286 | 1 | GO:0018279 | The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification. |  |
| 0.024 | 1 | GO:0006457 | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | Zm.701.1.A1_a_at | At1g20200 | 26S proteasome non-ATPase regulatory subunit 3 /// 26S proteasome non-ATPase regulatory subunit 3 | - | 2e-8 | At1g75990 | 26S proteasome regulatory subunit S3, putative (RPN3) | O.I. | H.G. | S.X. | |
| 0.18 | 11.6 | Zm.16493.1.S1_at | At1g20200 | ATP-dependent Clp protease proteolytic subunit | - | 6e-1 | At5g23140 | NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7) | O.I. | H.G. | S.X. | |
| 0.14 | 7.7 | ZmAffx.1058.1.A1_at | At1g20200 | - | - | 1e+1 | At5g65480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.08 | 3.4 | Zm.18090.1.A1_at | At1g20200 | - | - | 1e-8 | At1g15880 | GOS11 (golgi snare 11) | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | Zm.1745.1.A1_at | At1g20200 | hypothetical protein LOC100278579 | - | 4e-2 | At5g18490 | unknown protein | O.I. | H.G. | S.X. | |
| 0.03 | 1.1 | Zm.18275.1.A1_at | At1g20200 | hypothetical protein LOC100278416 | - | 6e+0 | At2g32360 | ubiquitin family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage