Co-expression analysis

Gene ID Os09g0541000
Gene name
Homology with ArabidopsisSimilar to At2g37170: PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) (HF=1e-5)
Module size 13 genes
NF 0.28
%ile 28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.10.92Os09g0541000AK104786.1--1e-5At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.5877.00.95Os01g0279700AK067683.1-Major facilitator superfamily protein2e-48At4g00370ANTR2O.I.H.G.S.X.
0.4253.90.95Os11g0150100AK068167.1-Phosphoglycerate/bisphosphoglycerate mutase familyprotein6e-2At5g22620phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.4051.10.94Os01g0303000AK058929.1-CP12 protein-like protein2e-6At3g62410CP12-2O.I.H.G.S.X.
0.3745.00.92Os09g0530000AK062568.1-Rhodanese-like domain containing protein2e-7At4g27700rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.3134.50.92Os03g0695500CB636267-Protein of unknown function DUF1517 family protein1e+0At1g54520unknown proteinO.I.H.G.S.X.
0.2931.10.94Os06g0107700D17790.1-Ferredoxin--NADP reductase, leaf isozyme,chloroplast precursor (EC 1.18.1.2) (FNR)9e-96At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.H.G.S.X.
0.2931.10.94Os02g0225000AK104878.1-Mitochondrial substrate carrier family protein2e-4At2g39970peroxisomal membrane protein (PMP36)O.I.H.G.S.X.
0.2524.10.95Os03g0857400AK062137.1-Conserved hypothetical protein3e-3At4g22890PGR5-LIKE AO.I.H.G.S.X.
0.1813.70.94Os02g0815400AK061270.1-Conserved hypothetical protein3e-9At5g37360unknown proteinO.I.H.G.S.X.
0.1712.60.94Os08g0502700AK064774.1-Aminotransferase 22e-13At2g13360AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)O.I.H.G.S.X.
0.1712.60.94Os06g0669400AK064913.1--4e-90At1g06430FTSH8O.I.H.G.S.X.
0.1510.30.95Os01g0151200AK110801.1-Inner membrane protein ALBINO3, chloroplastprecursor. Splice isoform 21e-37At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.899.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.298.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0051205The process by which a protein is incorporated into a biological membrane.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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