Co-expression analysis

Gene ID Os09g0531200
Gene name
Homology with ArabidopsisSimilar to At2g01080: - (HF=7e-1)
Module size 6 genes
NF 0.73
%ile 95.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.97Os09g0531200AK064107.1-RNA recognition motif 2 domain containing protein7e-1At2g01080-O.I.H.G.S.X.
0.7793.10.98Os11g02957009639.m01769--5e+0At4g39570kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.7391.10.98Os08g0515100NM_188989.1-Sulfotransferase family protein2e-3At3g45080sulfotransferase family proteinO.I.H.G.S.X.
0.6787.20.98Os12g04481009640.m02506--1e+0At4g16240unknown proteinO.I.H.G.S.X.
0.6787.20.98Os05g0225100AK109834.1-Conserved hypothetical protein2e-1At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)O.I.H.G.S.X.
0.5777.00.98Os04g0422700AK111485.1-Conserved hypothetical protein5e-1At2g11005glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the barley gene, AF108009_at, orthologous to the query gene, Os09g0531200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.1AF108009_atAt2g01080--3e-1At1g01453-O.I.H.G.S.X.
0.5572.0HT07M11u_atAt2g01080--6e+0At4g17870-O.I.H.G.S.X.
0.5066.9HVSMEn0007B03f2_atAt2g01080--3e+0At1g65820microsomal glutathione s-transferase, putativeO.I.H.G.S.X.
0.1716.9HVSMEn0001D07r2_atAt2g01080--6e-1At2g25260unknown proteinO.I.H.G.S.X.
0.011.1Contig1434_s_atAt2g01080--2e-1At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.000.2Contig3603_atAt2g01080--2e-15At3g25400-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage