Co-expression analysis

Gene ID Os09g0520500
Gene name
Homology with ArabidopsisSimilar to At5g41600: BTI3 (VIRB2-INTERACTING PROTEIN 3) (HF=2e-2)
Module size 14 genes
NF 0.39
%ile 46.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5777.00.86Os09g0520500AK107978.1-Hypothetical protein2e-2At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)O.I.H.G.S.X.
0.5471.90.91Os03g0320800AK103265.1-Protein kinase domain containing protein3e-2At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.4863.70.91Os06g0478600AK064086.1-Leucine-rich repeat, plant specific containingprotein9e-1At5g01380transcription factorO.I.H.G.S.X.
0.4863.70.91Os03g0239000AK061284.1-Glycoside hydrolase, family 16 domain containingprotein2e-4At1g32170XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4)O.I.H.G.S.X.
0.4863.70.91Os06g0217900AK103765.1-Cyclin, C-terminal domain containing protein8e-1At4g14520DNA-directed RNA polymerase II-relatedO.I.H.G.S.X.
0.4660.90.89Os01g0914400AK063138.1-Conserved hypothetical protein6e-3At4g12970unknown proteinO.I.H.G.S.X.
0.3745.00.93Os02g0756100AK060615.1-Conserved hypothetical protein2e+0At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.3338.80.93Os04g0525700AK105830.1-Peptidase S10, serine carboxypeptidase familyprotein2e-1At5g23210SCPL34O.I.H.G.S.X.
0.3236.30.93Os01g0957100AK122121.1-Protein kinase domain containing protein2e+0At3g45230hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3134.50.91Os04g0649200AK103112.1-Plant protein of unknown function DUF869 familyprotein4e-4At2g23360transport protein-relatedO.I.H.G.S.X.
0.2931.10.89Os03g0791700AK103914.1-Protein kinase domain containing protein1e-1At3g12360ITN1 (INCREASED TOLERANCE TO NACL)O.I.H.G.S.X.
0.2727.50.94Os04g0517000AK101663.1-Conserved hypothetical protein3e-2At1g11700unknown proteinO.I.H.G.S.X.
0.2524.10.89Os09g0456100AK072474.1-Remorin, C-terminal region domain containingprotein4e-1At4g24430lyaseO.I.H.G.S.X.
0.2321.20.94Os01g0326000AK061371.1-Peroxidase 12e-1At1g44970peroxidase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.798.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0201GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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