Co-expression analysis

Gene ID Os09g0520200
Gene name
Homology with ArabidopsisSimilar to At4g24160: hydrolase, alpha/beta fold family protein (HF=2e-37)
Module size 6 genes
NF 0.12
%ile 9.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.92Os09g05202009637.m02967-Alpha/beta hydrolase family protein2e-37At4g24160hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.3134.50.95Os02g0601100AK120475.1-Nucleotide-binding protein3e-46At5g50960NBP35 (NUCLEOTIDE BINDING PROTEIN 35)O.I.H.G.S.X.
0.2727.50.95Os02g0750600AK066145.1-Ubiquitin domain containing protein6e-7At1g22050MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)O.I.H.G.S.X.
0.1510.30.93Os04g0556300AY100689.1-Glutathione peroxidase-like protein GPX54Hv3e-33At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.H.G.S.X.
0.094.90.95Os06g0714200BM419528-Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein8e-19At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.042.00.93Os05g0154600AK104006.1-The start codon is not identified.1e-2At3g05545transcription factor, putative / zinc finger (C3HC4 type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.998.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0571GO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.Link to AmiGO
0.0281GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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