Co-expression analysis

Gene ID Os09g0517700
Gene name
Homology with ArabidopsisSimilar to At5g48370: thioesterase family protein (HF=1e-9)
Module size 6 genes
NF 0.16
%ile 13.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.93Os09g0517700AK071305.1-Thioesterase superfamily domain containing protein1e-9At5g48370thioesterase family proteinO.I.H.G.S.X.
0.3644.00.93Os02g0274700AK105691.1-Conserved hypothetical protein1e+0At3g0208040S ribosomal protein S19 (RPS19A)O.I.H.G.S.X.
0.2625.60.94Os08g0128300AK103383.1--1e-9At1g13180DIS1 (DISTORTED TRICHOMES 1)O.I.H.G.S.X.
0.1813.70.94Os05g0443300CB621506-Sec23/Sec24 trunk region domain containing protein4e-13At2g27460sec23/sec24 transport family proteinO.I.H.G.S.X.
0.094.90.95Os02g0184000AK072584.1-Zn-finger, DHHC type domain containing protein1e-46At5g20350TIP1 (TIP GROWTH DEFECTIVE 1)O.I.H.G.S.X.
0.042.00.94Os07g0476500AK066346.1-Peptidyl-prolyl cis-trans isomerase, cyclophilintype domain containing protein1e-5At3g66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
137.6100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.696.9GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.696.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.296.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM159187SAM, biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
4.796.4GSM159188SAM, biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
4.496.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.095.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0241GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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