Co-expression analysis

Gene ID Os09g0516600
Gene name
Homology with ArabidopsisSimilar to At1g06130: GLX2-4 (glyoxalase 2-4) (HF=2e-7)
Module size 6 genes
NF 0.57
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os09g0516600AK103563.1-Glyoxalase II2e-7At1g06130GLX2-4 (glyoxalase 2-4)O.I.H.G.S.X.
0.7793.10.93Os01g0236700AK067319.1--3e-17At1g64530RWP-RK domain-containing proteinO.I.H.G.S.X.
0.4660.90.95Os03g0738400AK119226.1-Serine hydroxymethyltransferase, mitochondrialprecursor (EC 2.1.2.1) (Serine methylase) (Glycinehydroxymethyltransferase) (SHMT)6e-110At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.4458.10.95Os01g0328600NM_183835.1-Conserved hypothetical protein2e+0At2g32790ubiquitin-conjugating enzyme, putativeO.I.H.G.S.X.
0.3338.80.95Os06g0213400AK071478.1-Eukaryotic protein of unknown function DUF829family protein9e-1At2g15695unknown proteinO.I.H.G.S.X.
0.2727.50.95Os02g0771100AB040053.1-COP1 regulatory protein (Constitutivephotomorphogenesis protein 1)3e-29At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.099.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.697.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006563The chemical reactions and pathways involving L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.Link to AmiGO
0.2001GO:0006544The chemical reactions and pathways involving glycine, aminoethanoic acid.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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