Co-expression analysis

Gene ID Os09g0481650
Gene name
Homology with ArabidopsisSimilar to At1g44830: AP2 domain-containing transcription factor TINY, putative (HF=3e-1)
Module size 7 genes
NF 0.56
%ile 76.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.98Os09g04816509637.m02714--3e-1At1g44830AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.7189.60.98Os03g06224009631.m04085-Conserved hypothetical protein4e+0At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.5573.70.98Os06g0275750NM_185804.1--1e-1At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.5371.30.98Os03g06381009631.m04211--3e+0At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)O.I.H.G.S.X.
0.4458.10.98Os10g03274009638.m01495--2e+0At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4253.90.98Os12g06399009640.m04362--2e-1At1g52827unknown proteinO.I.H.G.S.X.
0.4051.10.99Os07g06321009635.m04398--5e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.699.1GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.098.7GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.898.6GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.698.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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