Co-expression analysis

Gene ID Os09g0478600
Gene name
Homology with ArabidopsisSimilar to At3g06890: unknown protein (HF=5e+0)
Module size 7 genes
NF 0.07
%ile 5.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4762.30.87Os09g0478600AK109529.1-The start codon is not identified.5e+0At3g06890unknown proteinO.I.H.G.S.X.
0.2016.50.88Os08g0408500AK068312.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-1At1g53170ERF8O.I.H.G.S.X.
0.116.50.87Os01g0880200AK100345.1-Glycosyl transferase, family 8 protein1e-13At1g77130PGSIP2 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2)O.I.H.G.S.X.
0.094.90.89Os08g0557600AK102459.1-Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)(Ascorbate free radical reductase) (AFR reductase)2e-20At5g03630ATMDAR2O.I.H.G.S.X.
0.084.20.87Os05g0176700AK071729.1-Conserved hypothetical protein6e-6At5g23100unknown proteinO.I.H.G.S.X.
0.073.70.86Os02g0753800AK101787.1-Annexin p342e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.H.G.S.X.
0.021.00.86Os05g0209500AK105188.1-Conserved hypothetical protein5e+0At5g48530unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
12.598.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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