Co-expression analysis

Gene ID Os09g0472900
Gene name
Homology with ArabidopsisSimilar to At3g03920: Gar1 RNA-binding region family protein (HF=8e+0)
Module size 7 genes
NF 0.67
%ile 90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.70Os09g0472900BI797815-Expansin-related protein 2 precursor (AtEXPR2)(Ath-ExpGamma-1.1)8e+0At3g03920Gar1 RNA-binding region family proteinO.I.H.G.S.X.
0.7591.90.70Os03g0250400AK121385.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At5g59610DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.7591.90.70Os06g0253100AK105317.1-Heat shock protein Hsp20 domain containing protein9e-2At1g12665-O.I.H.G.S.X.
0.7189.60.76Os01g0135800AK063681.1-17 Kd heat shock protein6e+0At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.5676.30.70Os12g0630100AK069182.1-Thaumatin-like protein precursor1e-1At4g31460ribosomal protein L28 family proteinO.I.H.G.S.X.
0.5676.30.73Os09g04624009637.m02534-Patatin family protein9e+0At3g26510octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.5068.00.76Os11g0244200AK107883.1-Pisum sativum 17.9 kDa heat shock protein(hsp17.9) (Fragment)1e-3At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.298.8GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
13.598.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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