Co-expression analysis

Gene ID Os09g0469600
Gene name
Homology with ArabidopsisSimilar to At2g17300: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.67
%ile 90.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.93Os09g0469600AK058776.1-Hypothetical protein2e+0At2g17300unknown proteinO.I.H.G.S.X.
0.7793.10.93Os02g0285300AK058613.1-DREPP plasma membrane polypeptide family protein2e+0At5g51720unknown proteinO.I.H.G.S.X.
0.7793.10.95Os07g0590800AK062359.1-Hypothetical protein1e+0At5g61490-O.I.H.G.S.X.
0.6787.20.93Os01g0668100AK105603.1-Beta-Ig-H3/fasciclin domain containing protein1e-1At3g57500unknown proteinO.I.H.G.S.X.
0.4660.90.93Os03g0286500AK060649.1-RNA-binding region containing protein 1 (HSRNASEB)(ssDNA binding protein SEB4) (CLL-associated antigenKW-5). Splice isoform 28e-10At3g54770RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3846.90.93Os03g0223000AK065199.1-Atypical receptor-like kinase MARK3e-1At3g17840RLK902O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
10.398.1GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
8.797.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.597.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage