Co-expression analysis

Gene ID Os09g0462300
Gene name
Homology with ArabidopsisSimilar to At5g16200: 50S ribosomal protein-related (HF=3e+0)
Module size 6 genes
NF 0.28
%ile 28.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.96Os09g04623009637.m02532-Esterase/lipase/thioesterase domain containingprotein3e+0At5g1620050S ribosomal protein-relatedO.I.H.G.S.X.
0.5573.70.96Os07g0216100AK107820.1-Hypothetical protein9e-2At5g66490unknown proteinO.I.H.G.S.X.
0.2931.10.96Os09g04335009637.m02294-Glycosyl transferase, family 31 protein5e-1At3g29300unknown proteinO.I.H.G.S.X.
0.2625.60.96Os01g0176700AK109808.1-Myb, DNA-binding domain containing protein1e-12At2g03500myb family transcription factorO.I.H.G.S.X.
0.2219.40.96Os02g06026009630.m03753-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e+0At5g24316proline-rich family proteinO.I.H.G.S.X.
0.116.50.96Os03g0118100AK072029.1-Conserved hypothetical protein2e-1At4g15460glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.499.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.998.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
10.098.0GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.798.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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