Co-expression analysis

Gene ID Os09g0446300
Gene name
Homology with ArabidopsisSimilar to At1g06475: unknown protein (HF=2e-5)
Module size 13 genes
NF 0.57
%ile 77.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.95Os09g04463009637.m02401--2e-5At1g06475unknown proteinO.I.H.G.S.X.
0.8395.80.96Os09g03407009637.m01448--1e-1At2g30370allergen-relatedO.I.H.G.S.X.
0.7391.10.97Os09g03950009637.m01974--1e+1At5g12330LRP1 (LATERAL ROOT PRIMORDIUM 1)O.I.H.G.S.X.
0.7088.40.96Os11g06804009639.m04228--7e+0At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.H.G.S.X.
0.6787.20.96Os01g0230800NM_188614.1-Hypothetical protein2e+0At2g19070SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)O.I.H.G.S.X.
0.6483.40.97Os06g03304009634.m02205-Sterol desaturase family protein1e-1At1g14290SBH2 (SPHINGOID BASE HYDROXYLASE 2)O.I.H.G.S.X.
0.6079.70.96Os12g04949009640.m03004--9e+0At4g37550formamidase, putative / formamide amidohydrolase, putativeO.I.H.G.S.X.
0.5978.00.97Os10g0367600NM_196087.1--6e-1At5g26660ATMYB86 (MYB DOMAIN PROTEIN 86)O.I.H.G.S.X.
0.5978.00.97Os01g0238300NM_188690.1--2e-1At5g45280pectinacetylesterase, putativeO.I.H.G.S.X.
0.5877.00.97Os07g0219700XM_354150.1--7e-1At4g18860unknown proteinO.I.H.G.S.X.
0.4863.70.96Os11g05996009639.m03515--1e+1At5g43540zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3644.00.96Os05g04110009633.m03145--5e+0At4g30097unknown proteinO.I.H.G.S.X.
0.3236.30.96Os11g05423009639.m03057--5e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.099.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
31.599.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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