Co-expression analysis

Gene ID Os09g0433600
Gene name
Homology with ArabidopsisSimilar to At1g07660: histone H4 (HF=2e-20)
Module size 6 genes
NF 0.45
%ile 57.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.95Os09g0433600AK058686.1-Histone H42e-20At1g07660histone H4O.I.H.G.S.X.
0.4458.10.96Os01g0756900AK058427.1-Conserved hypothetical protein8e-2At1g67860unknown proteinO.I.H.G.S.X.
0.4051.10.95Os03g0279200CA753594-Histone H2A1e-7At5g02560HTA12O.I.H.G.S.X.
0.4051.10.96Os01g0153100CB662157-Histone H2B.18e-21At1g07790HTB1O.I.H.G.S.X.
0.2931.10.95Os10g0418000AF193345.1-Histone H2A.F/Z (At3g54560)6e-10At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.S.X.
0.2219.40.95Os05g0466600AK119240.1--7e-18At5g59690histone H4O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
55.399.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
43.999.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
42.599.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.799.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.799.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.499.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.198.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.998.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.798.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.698.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0982GO:0051276A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.Link to AmiGO
0.0952GO:0006334The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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