Co-expression analysis

Gene ID Os09g0417500
Gene name
Homology with ArabidopsisSimilar to At1g77145: unknown protein (HF=3e-1)
Module size 10 genes
NF 0.62
%ile 83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.96Os09g0417500AK063513.1-TPR-like domain containing protein3e-1At1g77145unknown proteinO.I.H.G.S.X.
0.7591.90.98Os10g0575800AK120242.1-ARM repeat fold domain containing protein6e-1At4g36791unknown proteinO.I.H.G.S.X.
0.7491.40.97Os05g0596600AK107823.1-SMC protein, N-terminal domain containing protein6e-28At5g15920structural maintenance of chromosomes (SMC) family protein (MSS2)O.I.H.G.S.X.
0.7189.60.97Os03g0396900AK071398.1-PIMT6e-6At1g45231-O.I.H.G.S.X.
0.6787.20.97Os01g0226500AK066242.1-Conserved hypothetical protein2e-1At2g46200unknown proteinO.I.H.G.S.X.
0.6787.20.98Os03g0749800AK111770.1-Protein kinase3e-22At5g20930TSL (TOUSLED)O.I.H.G.S.X.
0.5978.00.97Os02g0591600AK060151.1-WD40-like domain containing protein1e-1At2g3719060S ribosomal protein L12 (RPL12A)O.I.H.G.S.X.
0.5777.00.97Os03g08160009631.m05921-Conserved hypothetical protein9e-6At5g05230ubiquitin-protein ligaseO.I.H.G.S.X.
0.5068.00.98Os07g0606500AK070274.1-ATP-dependent RNA helicase, eIF-4A family8e-6At5g08110DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.3644.00.97Os03g0725300AK063969.1-Metallophosphoesterase domain containing protein2e-7At4g31770calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.299.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.298.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.297.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0051276A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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