Co-expression analysis

Gene ID Os09g0383400
Gene name
Homology with ArabidopsisSimilar to At1g59990: DEAD/DEAH box helicase, putative (RH22) (HF=9e-5)
Module size 6 genes
NF 0.50
%ile 66.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os09g0383400AK103385.1-Helicase, C-terminal domain containing protein9e-5At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.5978.00.96Os06g0283200AK073829.1-Zn-finger-like, PHD finger domain containingprotein1e+0At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.5573.70.96Os05g0194000AK107561.1-Hypothetical protein1e+0At3g29300unknown proteinO.I.H.G.S.X.
0.3846.90.96Os01g0613900AK119181.1-Protein of unknown function UPF0052 and CofDfamily protein1e-15At2g34090MEE18 (maternal effect embryo arrest 18)O.I.H.G.S.X.
0.3846.90.97Os10g0477200AK067154.1-TPR-like domain containing protein6e-3At3g21470pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3032.70.96Os03g0326600AK107632.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e-25At1g09230RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
32.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.198.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.298.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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