Co-expression analysis

Gene ID Os09g0380600
Gene name
Homology with ArabidopsisSimilar to At5g67070: RALFL34 (ralf-like 34) (HF=1e+1)
Module size 6 genes
NF 0.41
%ile 51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.78Os09g0380600AK063655.1-Conserved hypothetical protein1e+1At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.3644.00.81Os09g0547500AK062595.1-Lysine decarboxylase-like protein5e-1At2g35990-O.I.H.G.S.X.
0.3338.80.81Os09g0457900AK067195.1-AP2 domain containing protein RAP2.6 (Fragment)5e-1At3g23230ethylene-responsive factor, putativeO.I.H.G.S.X.
0.3338.80.81Os01g0597600AU056799-Amino acid/polyamine transporter II family protein5e+0At2g35480unknown proteinO.I.H.G.S.X.
0.3338.80.85Os03g0315400BI807304-MYB-related protein 3404e+0At5g27247unknown proteinO.I.H.G.S.X.
0.2931.10.80Os09g0341500AK073913.1-Cyclin-like F-box domain containing protein2e-1At4g25190unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
49.699.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the maize gene, Zm.15213.1.A1_at, orthologous to the query gene, Os09g0380600

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.15213.1.A1_atAt5g67070--3e+0At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.5065.7Zm.14474.1.S1_a_atAt5g67070hypothetical protein LOC100273044-1e-33At2g34560katanin, putativeO.I.H.G.S.X.
0.4048.5Zm.19176.1.S1_atAt5g67070--3e-18At5g51700PBS2 (PPHB SUSCEPTIBLE 2)O.I.H.G.S.X.
0.3233.4Zm.6190.1.A1_atAt5g67070--9e-8At2g20490NOP10O.I.H.G.S.X.
0.169.4Zm.17497.1.A1_atAt5g67070hypothetical protein LOC100273930-3e+0Atmg00140-O.I.H.G.S.X.
0.136.8Zm.6049.3.A1_a_atAt5g67070phosphatidylinositol transporter/ transporter-3e-3At1g76640calmodulin-related protein, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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