Co-expression analysis

Gene ID Os09g0380600
Gene name
Homology with ArabidopsisSimilar to At5g67070: RALFL34 (ralf-like 34) (HF=1e+1)
Module size 6 genes
NF 0.41
%ile 51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.78Os09g0380600AK063655.1-Conserved hypothetical protein1e+1At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.3644.00.81Os09g0547500AK062595.1-Lysine decarboxylase-like protein5e-1At2g35990-O.I.H.G.S.X.
0.3338.80.81Os09g0457900AK067195.1-AP2 domain containing protein RAP2.6 (Fragment)5e-1At3g23230ethylene-responsive factor, putativeO.I.H.G.S.X.
0.3338.80.81Os01g0597600AU056799-Amino acid/polyamine transporter II family protein5e+0At2g35480unknown proteinO.I.H.G.S.X.
0.3338.80.85Os03g0315400BI807304-MYB-related protein 3404e+0At5g27247unknown proteinO.I.H.G.S.X.
0.2931.10.80Os09g0341500AK073913.1-Cyclin-like F-box domain containing protein2e-1At4g25190unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
49.699.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.CL1050Contig1_at, orthologous to the query gene, Os09g0380600

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6PsAffx.CL1050Contig1_atAt5g67070--5e+0At1g53708RTFL9 (ROTUNDIFOLIA LIKE 9)O.I.H.G.S.X.
0.2532.6PsAffx.C51000021_s_atAt5g67070--7e-1At2g17920nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.2126.6PsAffx.CL289Contig1_atAt5g67070--2e+0At3g48880F-box family proteinO.I.H.G.S.X.
0.1114.2PsAffx.CL974Contig1_atAt5g67070--2e+0At3g23637DVL21 (DEVIL 21)O.I.H.G.S.X.
0.1013.0PsAffx.CL95Contig1_atAt5g67070--1e+1At4g10380NIP5O.I.H.G.S.X.
0.047.0PsAffx.C55000004_s_atAt5g67070--9e-2At2g47470UNE5 (UNFERTILIZED EMBRYO SAC 5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage