Co-expression analysis

Gene ID Os09g0378700
Gene name
Homology with ArabidopsisSimilar to At1g49780: PUB26 (PLANT U-BOX 26) (HF=4e+0)
Module size 7 genes
NF 0.02
%ile 1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.82Os09g03787009637.m01814-U box domain containing protein4e+0At1g49780PUB26 (PLANT U-BOX 26)O.I.H.G.S.X.
0.6787.20.86Os12g0168100AK107125.1-AP2 domain containing protein RAP2.6 (Fragment)1e-5At1g43160RAP2.6 (related to AP2 6)O.I.H.G.S.X.
0.1915.10.87Os02g0736300AK099700.1-Membrane attack complexcomponent/perforin/complement C9 family protein4e+0At5g15330SPX4 (SPX DOMAIN GENE 4)O.I.H.G.S.X.
0.127.20.86Os10g0122000BX929165-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein8e-1At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)O.I.H.G.S.X.
0.042.00.87Os01g0241000AK119763.1--2e-1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.010.50.88Os06g0686400AK063215.1-Plant lipid transfer protein/Par allergen familyprotein9e-1At4g27810unknown proteinO.I.H.G.S.X.
0.010.50.83Os02g0732600AK108709.1-Typical P-type R2R3 Myb protein (Fragment)2e-3At4g26930MYB97 (myb domain protein 97)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.398.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.298.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.098.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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