Co-expression analysis

Gene ID Os09g0363100
Gene name
Homology with ArabidopsisSimilar to At4g29750: RNA binding (HF=4e-4)
Module size 6 genes
NF 0.72
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.95Os09g0363100AK065958.1-Protein of unknown function UPF0044 family protein4e-4At4g29750RNA bindingO.I.H.G.S.X.
0.9198.90.96Os08g0407000CB658542-ab initio prediction with EST support8e-6At1g78010tRNA modification GTPase, putativeO.I.H.G.S.X.
0.6079.70.94Os11g0610900AK100567.1-Seryl-tRNA synthetase, class IIa family protein7e-8At1g11870SRS (SERYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.6079.70.95Os03g0334100AK120587.1-Hypothetical protein8e-1At3g44755unknown proteinO.I.H.G.S.X.
0.6079.70.95Os05g0519600AK102422.1-4-methyl-5(B-hydroxyethyl)-thiazol monophosphatebiosynthesis enzyme7e-2At5g48953LCR86 (Low-molecular-weight cysteine-rich 86)O.I.H.G.S.X.
0.5068.00.95Os01g0960300BI813093-Glucose inhibited division protein A7e+0At5g57510unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.198.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.298.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage