Co-expression analysis

Gene ID Os09g0349600
Gene name
Homology with ArabidopsisSimilar to At5g20050: protein kinase family protein (HF=3e-1)
Module size 31 genes
NF 0.20
%ile 18.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.73Os09g03496009637.m01544-Protein kinase domain containing protein3e-1At5g20050protein kinase family proteinO.I.H.G.S.X.
0.4762.30.89Os02g0110600AK061840.1-Conserved hypothetical protein6e-5At5g61350protein kinase family proteinO.I.H.G.S.X.
0.4355.40.86Os03g0668500AK064871.1-Hypothetical protein5e+0At5g25160ZFP3 (ZINC FINGER PROTEIN 3)O.I.H.G.S.X.
0.3948.30.92Os04g04231009632.m03324-Aromatic-ring hydroxylase family protein5e-1At5g16380unknown proteinO.I.H.G.S.X.
0.3745.00.91Os05g0328000AK107977.1-Hypothetical protein3e-1At3g2850060S acidic ribosomal protein P2 (RPP2C)O.I.H.G.S.X.
0.3541.70.93Os02g01804009630.m00798--4e-2At1g06475unknown proteinO.I.H.G.S.X.
0.3541.70.89Os04g0496800BI811923-Calcium-binding EF-hand domain containing protein2e-1At5g39720AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)O.I.H.G.S.X.
0.3440.00.90Os04g0655400AK109273.1-Protein kinase domain containing protein2e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.2727.50.93Os10g04722019638.m02914--3e+0At4g26460-O.I.H.G.S.X.
0.2625.60.94Os03g03921009631.m02709--1e+0At3g01230unknown proteinO.I.H.G.S.X.
0.2625.60.91Os01g0311400NM_183695.1-Zn-finger, RING domain containing protein5e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.
0.2524.10.89Os01g0230200AK065732.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein3e-10At2g20100ethylene-responsive family proteinO.I.H.G.S.X.
0.2422.40.93Os11g0195800AK061281.1-Hypothetical protein1e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.
0.2422.40.90Os11g0111900AK061535.1-BTB/POZ domain containing protein2e+0At5g26890unknown proteinO.I.H.G.S.X.
0.2219.40.92Os12g02263009640.m01201-Allyl alcohol dehydrogenase4e+0At5g01910unknown proteinO.I.H.G.S.X.
0.2016.50.93Os01g0882400AK108538.1--2e+0At4g05070unknown proteinO.I.H.G.S.X.
0.2016.50.84Os04g0410200AK065005.1-Protein kinase family protein1e-1At5g55910D6PK (D6 PROTEIN KINASE)O.I.H.G.S.X.
0.1915.10.94Os04g04841009632.m03877--2e+0At5g12870MYB46 (MYB DOMAIN PROTEIN 46)O.I.H.G.S.X.
0.1712.60.92Os07g02329009635.m01270-Heavy metal translocating P-type ATPase familyprotein3e-11At4g30110HMA2O.I.H.G.S.X.
0.1712.60.93Os09g05164509637.m02938--3e-1At5g02220unknown proteinO.I.H.G.S.X.
0.1712.60.94Os05g03932009633.m02996-Conserved hypothetical protein4e-1At3g06180structural constituent of ribosomeO.I.H.G.S.X.
0.1611.30.95Os08g01831009636.m00794--7e+0At4g13520SMAP1 (SMALL ACIDIC PROTEIN 1)O.I.H.G.S.X.
0.1611.30.92Os06g06503009634.m04266--6e-4At1g51930zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1510.30.91Os01g0302800AK062358.1-Hypothetical protein6e+0At5g17360-O.I.H.G.S.X.
0.138.20.93Os08g01743009636.m00714-Transferase family protein3e+0At4g19870kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.138.20.93Os03g06757009631.m04590-Conserved hypothetical protein9e-2At4g38860auxin-responsive protein, putativeO.I.H.G.S.X.
0.116.50.94Os04g06229009632.m05153--3e+0At3g62610ATMYB11 (MYB DOMAIN PROTEIN 11)O.I.H.G.S.X.
0.105.70.90Os05g04573019633.m03550--3e+0At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.094.90.92Os10g0549700NM_197650.1-Conserved hypothetical protein1e+0At1g06190ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanismO.I.H.G.S.X.
0.073.70.75Os11g0250400AK059968.1-Ankyrin repeat containing protein5e-1At1g63610unknown proteinO.I.H.G.S.X.
0.073.70.95Os01g0523000AK105213.1-Hypothetical protein6e+0At4g21140unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.599.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.598.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0331GO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.Link to AmiGO
0.0211GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO
0.0111GO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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