Co-expression analysis

Gene ID Os09g0345000
Gene name
Homology with ArabidopsisSimilar to At1g53400: unknown protein (HF=7e-12)
Module size 7 genes
NF 0.29
%ile 30.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4863.70.95Os09g0345000AK121772.1-Conserved hypothetical protein7e-12At1g53400unknown proteinO.I.H.G.S.X.
0.3338.80.97Os11g0114700AK070834.1-PAP/25A core domain containing protein4e-23At3g51620-O.I.H.G.S.X.
0.3134.50.96Os03g0119000AK071417.1-Prolyl 4-hydroxylase, alpha subunit domaincontaining protein2e-3At5g51880iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.3134.50.96Os12g0618300AK103368.1-GTP-binding protein-like (Fragment)1e-37At2g27200GTP-binding family proteinO.I.H.G.S.X.
0.2625.60.96Os05g0515700AK069076.1-Conserved hypothetical protein2e-14At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)O.I.H.G.S.X.
0.2016.50.95Os06g0186600AK099819.1-Conserved hypothetical protein2e-16At4g30780unknown proteinO.I.H.G.S.X.
0.1712.60.96Os09g0514900AK102371.1-Protein of unknown function DUF654 family protein2e-2At2g46900-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.897.8GSM262001IAC165, 2 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
6.297.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM262000IAC165, 2 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
5.997.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0871GO:0019538The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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