Co-expression analysis

Gene ID Os09g0343100
Gene name
Homology with ArabidopsisSimilar to At5g18060: auxin-responsive protein, putative (HF=2e+0)
Module size 11 genes
NF 0.80
%ile 98.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5471.90.96Os09g03431009637.m01473-Conserved hypothetical protein2e+0At5g18060auxin-responsive protein, putativeO.I.H.G.S.X.
0.9599.60.97Os07g01472009635.m00468--2e-1At3g20650mRNA capping enzyme family proteinO.I.H.G.S.X.
0.9198.90.97Os11g06769209639.m04193--5e+0At5g18210short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.9198.90.97Os12g05046009640.m03105--3e+0At2g31985unknown proteinO.I.H.G.S.X.
0.8696.40.97Os06g06197009634.m03998--2e-1At5g50345-O.I.H.G.S.X.
0.8094.60.97Os05g01581009633.m00583--1e-1At2g11910unknown proteinO.I.H.G.S.X.
0.7793.10.96Os04g03773009632.m02927--4e-3At1g28190unknown proteinO.I.H.G.S.X.
0.7793.10.97Os09g02768019637.m00811--2e+0At3g25585AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE)O.I.H.G.S.X.
0.7491.40.96Os03g01640669631.m00612--5e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.7289.80.97Os11g02126009639.m01008--9e-1At3g22820allergen-relatedO.I.H.G.S.X.
0.6787.20.96Os03g03851009631.m02629-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein4e+0At5g13290CRN (CORYNE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.899.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
41.599.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
25.799.5GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
21.799.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.798.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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