Co-expression analysis

Gene ID Os09g0341600
Gene name
Homology with ArabidopsisSimilar to At1g77855: unknown protein (HF=2e-1)
Module size 7 genes
NF 0.47
%ile 60.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.82Os09g0341600AK071689.1-Cyclin-like F-box domain containing protein2e-1At1g77855unknown proteinO.I.H.G.S.X.
0.6181.20.83Os09g0457900AK067195.1-AP2 domain containing protein RAP2.6 (Fragment)5e-1At3g23230ethylene-responsive factor, putativeO.I.H.G.S.X.
0.6181.20.86Os03g0315400BI807304-MYB-related protein 3404e+0At5g27247unknown proteinO.I.H.G.S.X.
0.5068.00.86Os05g05528009633.m04468-Conserved hypothetical protein4e+0At5g44060unknown proteinO.I.H.G.S.X.
0.3846.90.86Os02g0134200AK108331.1-Conserved hypothetical protein5e-1At5g12330LRP1 (LATERAL ROOT PRIMORDIUM 1)O.I.H.G.S.X.
0.3644.00.89Os03g02921009631.m01785-Protein phosphatase 2C family protein8e-1At4g08260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2321.20.83Os09g0542900AK073400.1-Conserved hypothetical protein2e+0At4g24026unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.898.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.898.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.698.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.498.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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