Co-expression analysis

Gene ID Os09g0326900
Gene name
Homology with ArabidopsisSimilar to At1g36730: eukaryotic translation initiation factor 5, putative / eIF-5, putative (HF=7e-36)
Module size 11 genes
NF 0.22
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.96Os09g0326900AK067685.1--7e-36At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeO.I.H.G.S.X.
0.3338.80.97Os05g0349500AK101703.1-RanBP1 domain containing protein7e-2At4g31440unknown proteinO.I.H.G.S.X.
0.3134.50.97Os05g0564200AK070198.1-U2 snRNP auxiliary factor, small subunit2e-22At1g27650ATU2AF35AO.I.H.G.S.X.
0.2727.50.97Os12g0628500AK122063.1-Methionine aminopeptidase-like protein2e-29At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)O.I.H.G.S.X.
0.2625.60.97Os03g07915009631.m05671-Synaptobrevin family protein6e-26At1g11890SEC22O.I.H.G.S.X.
0.2016.50.96Os01g0550100AK066233.1-Ubiquitin-specific protease 65e-21At1g51710UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)O.I.H.G.S.X.
0.1915.10.96Os03g0209400AK059829.1-Got1-like protein family protein9e-6At5g01430Got1-like family proteinO.I.H.G.S.X.
0.1813.70.96Os11g0296800AK069908.1-Conserved hypothetical protein1e+0At1g62333unknown proteinO.I.H.G.S.X.
0.1611.30.97Os03g0800100NM_185036.1-Cactin1e-22At1g03910-O.I.H.G.S.X.
0.1510.30.97Os02g0803700AK103936.1-26S protease regulatory subunit 6A homolog(TAT-binding protein homolog 1) (TBP-1)7e-72At3g05530RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)O.I.H.G.S.X.
0.1510.30.96Os04g0118400AK101166.1-Elongation factor EF-2 (Fragment)0At1g56070LOS1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0006446Any process that modulates the frequency, rate or extent of translational initiation.Link to AmiGO
0.0531GO:0006413The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.Link to AmiGO
0.0341GO:0006511The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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