Co-expression analysis

Gene ID Os09g0324100
Gene name
Homology with ArabidopsisSimilar to At3g57390: AGL18 (HF=2e+0)
Module size 20 genes
NF 0.40
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6683.90.97Os09g03241009637.m01284--2e+0At3g57390AGL18O.I.H.G.S.X.
0.5777.00.98Os06g01441009634.m00442--1e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5269.60.97Os07g0682500AK109592.1-Hypothetical protein6e-3At3g63450RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4863.70.98Os01g02473009629.m01428--4e+0At5g53490thylakoid lumenal 17.4 kDa protein, chloroplastO.I.H.G.S.X.
0.4863.70.98Os08g05162009636.m04093--2e+0At5g64140RPS28 (RIBOSOMAL PROTEIN S28)O.I.H.G.S.X.
0.4458.10.98Os01g05680009629.m03678--5e-1At5g26890unknown proteinO.I.H.G.S.X.
0.4253.90.98Os02g08229009630.m05753-Protein kinase domain containing protein3e-1At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4253.90.98Os07g06352509635.m04430--2e+0At4g29960unknown proteinO.I.H.G.S.X.
0.4152.40.98Os03g03674009631.m02463--3e+0At2g04864unknown proteinO.I.H.G.S.X.
0.3948.30.98Os12g01507009640.m00469-Purple acid phosphatase6e-4At3g52810PAP21 (PURPLE ACID PHOSPHATASE 21)O.I.H.G.S.X.
0.3948.30.98Os07g01075009635.m00070-Plant disease resistance response protein familyprotein5e+0At3g52561unknown proteinO.I.H.G.S.X.
0.3745.00.98Os01g09093009629.m06763-Conserved hypothetical protein2e-1At3g06780glycine-rich proteinO.I.H.G.S.X.
0.3644.00.98Os02g0605000AK108680.1-Cyclin, N-terminal domain containing protein8e-1At4g32030unknown proteinO.I.H.G.S.X.
0.3541.70.97Os01g0216700NM_188458.1-Conserved hypothetical protein5e-1At4g20290unknown proteinO.I.H.G.S.X.
0.3440.00.98Os06g01621009634.m00598-Protein of unknown function DUF569 family protein2e+0At3g02000ROXY1O.I.H.G.S.X.
0.2931.10.98Os06g02520009634.m01415--2e+0At2g31720DNA bindingO.I.H.G.S.X.
0.2727.50.99Os02g05460509630.m03255--1e+1At4g28750PSAE-1 (PSA E1 KNOCKOUT)O.I.H.G.S.X.
0.2625.60.98Os04g06802009632.m05705--4e+0At5g12360unknown proteinO.I.H.G.S.X.
0.2625.60.99Os08g0473800AK064124.1-Conserved hypothetical protein3e-3At4g25000AMY1 (ALPHA-AMYLASE-LIKE)O.I.H.G.S.X.
0.2321.20.98Os07g01357009635.m00360--1e+1At5g65274-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.199.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.899.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0481GO:0009620A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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