| Gene ID | Os09g0129600 |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g46610: arginine/serine-rich splicing factor, putative (HF=9e-1) |
| Module size | 6 genes |
| NF | 0.59 |
| %ile | 79.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 87.2 | 0.69 | Os09g0129600 | 9637.m00266 | - | Site-specific recombinase family protein | 9e-1 | At2g46610 | arginine/serine-rich splicing factor, putative | O.I. | H.G. | S.X. | |
| 0.73 | 91.1 | 0.64 | Os02g0649900 | 9630.m04172 | - | Iron-phytosiderophore transporter protein yellowstripe 1 | 2e-5 | At5g24380 | YSL2 (YELLOW STRIPE LIKE 2) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.81 | Os03g0751100 | BU673383 | - | - | 5e-28 | At4g16370 | ATOPT3 (OLIGOPEPTIDE TRANSPORTER) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.81 | Os07g0258400 | AK103557.1 | - | Metal transporter Nramp6 (AtNramp6) | 2e-8 | At1g80830 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.83 | Os01g0871600 | AK103248.1 | - | TGF-beta receptor, type I/II extracellular regionfamily protein | 2e-1 | At5g07730 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.82 | Os03g0379300 | AK068704.1 | - | - | 1e-1 | At4g26940 | galactosyltransferase family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 6.1 | 97.1 | GSM302920 | root_rep1 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling | |
| 5.5 | 96.8 | GSM195226 | Root | GSE7951 | Genome-wide gene expression profiling of rice stigma | |
| 5.4 | 96.8 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 4.8 | 96.5 | GSM195225 | Shoot | GSE7951 | Genome-wide gene expression profiling of rice stigma | |
| 4.2 | 96.0 | GSM154942 | Root_tZ-treatment_120min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| 4.1 | 96.0 | GSM377072 | Genomic DNA - 45 day old leaf sample - mutant d1137 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 3.9 | 95.8 | GSM154944 | Root_tZ-treatment_120min_replicate 3 | GSE6719 | Cytokinin responsive genes in rice | |
| 3.9 | 95.8 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 3.6 | 95.5 | GSM359922 | Pokkali root, salt-treated, biological replicate 1 | GSE14403 | Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress | |
| 3.5 | 95.3 | GSM154833 | Root_tZ-treatment_30min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.034 | 1 | GO:0006857 | The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. |  |
| 0.021 | 1 | GO:0006310 | Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | |
| 0.013 | 1 | GO:0045449 | Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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