Co-expression analysis

Gene ID Os09g0109300
Gene name
Homology with ArabidopsisSimilar to At5g44420: PDF1.2 (HF=2e+0)
Module size 6 genes
NF 0.28
%ile 28.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os09g01093009637.m00058--2e+0At5g44420PDF1.2O.I.H.G.S.X.
0.4458.10.99Os02g02323009630.m01278-TWIN SISTER of FT protein (TFL1 like protein)2e-2At4g20370TSF (TWIN SISTER OF FT)O.I.H.G.S.X.
0.3644.00.99Os01g07801009629.m05600--1e+0At1g52180major intrinsic family protein / MIP family proteinO.I.H.G.S.X.
0.2219.40.99Os10g0173200NM_195093.1--4e+0At5g40370glutaredoxin, putativeO.I.H.G.S.X.
0.1510.30.99Os04g04366009632.m03432--2e-2At2g20030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.149.30.99Os06g04763009634.m02692--5e-1Atcg01120-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.098.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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