Co-expression analysis

Gene ID Os08g0563200
Gene name
Homology with ArabidopsisSimilar to At1g76500: SOB3 (SUPPRESSOR OF PHYB-4#3) (HF=2e-1)
Module size 6 genes
NF 0.54
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.89Os08g0563200AK110263.1-Protein of unknown function DUF296 domaincontaining protein2e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.6079.70.90Os01g0297200AK109883.1-AAA ATPase, central region domain containingprotein6e-5At4g25835AAA-type ATPase family proteinO.I.H.G.S.X.
0.5068.00.91Os11g0152700AK102690.1-Transcription factor HBP-1b(C38) (Fragment)3e-1At1g77920bZIP family transcription factorO.I.H.G.S.X.
0.4051.10.91Os11g0700500AK111626.1-Myb, DNA-binding domain containing protein1e-8At5g59780MYB59 (MYB DOMAIN PROTEIN 59)O.I.H.G.S.X.
0.3338.80.90Os12g0639200AK122160.1-AAA ATPase, central region domain containingprotein4e-3At4g05380AAA-type ATPase family proteinO.I.H.G.S.X.
0.3338.80.91Os05g0278500AK067851.1-Transferase family protein2e-1At1g06980unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
64.599.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
37.099.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.899.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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