Co-expression analysis

Gene ID Os08g0562000
Gene name
Homology with ArabidopsisSimilar to At5g24560: AtPP2-B12 (Phloem protein 2-B12) (HF=4e+0)
Module size 6 genes
NF 0.71
%ile 93.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os08g05620009636.m04569--4e+0At5g24560AtPP2-B12 (Phloem protein 2-B12)O.I.H.G.S.X.
0.8395.80.98Os04g05235009632.m04244--2e-1At5g41390-O.I.H.G.S.X.
0.7391.10.98Os08g01657009635.m00582--3e+0At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)O.I.H.G.S.X.
0.5777.00.98Os08g01883009636.m00841--1e+0At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.5371.30.98Os01g0848000NM_190602.1--4e+0At3g02860zinc ion bindingO.I.H.G.S.X.
0.5068.00.98Os08g01995009636.m00954--3e+0At2g32788-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
61.999.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
18.999.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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