Co-expression analysis

Gene ID Os08g0537800
Gene name
Homology with ArabidopsisSimilar to At2g37600: 60S ribosomal protein L36 (RPL36A) (HF=4e-2)
Module size 9 genes
NF 0.55
%ile 73.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.97Os08g0537800AK059388.1-The start codon is not identified.4e-2At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.6483.40.98Os09g0281600AK067020.1-SWAP/Surp domain containing protein6e-12At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.5978.00.98Os03g0786800AK059186.1-The start codon is not identified.4e-54At5g46210CUL4 (CULLIN4)O.I.H.G.S.X.
0.5371.30.98Os03g0750800AK061386.1-Transcriptional adaptor ADA2b (AT4g16420/dl4235c)9e-11At4g16420ADA2B (HOMOLOG OF YEAST ADA2 2B)O.I.H.G.S.X.
0.5068.00.97Os08g0502800AK105444.1-SWIB/MDM2 domain containing protein2e-5At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5068.00.97Os11g0661400AK063910.1-AAA ATPase, central region domain containingprotein9e-37At1g02890AAA-type ATPase family proteinO.I.H.G.S.X.
0.4863.70.97Os07g0497000AK100332.1-Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2)2e-48At5g44800CHR4 (CHROMATIN REMODELING 4)O.I.H.G.S.X.
0.4863.70.97Os01g0744300NM_191171.1-Casein kinase-like protein4e-15At2g25760protein kinase family proteinO.I.H.G.S.X.
0.4863.70.97Os01g0585700NM_192531.1-SIT4 phosphatase-associated protein family protein2e-17At1g30470SIT4 phosphatase-associated family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.098.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0911GO:0007049The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.Link to AmiGO
0.0591GO:0006414The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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