Co-expression analysis

Gene ID Os08g0517200
Gene name
Homology with ArabidopsisSimilar to At4g29900: ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) (HF=1e-39)
Module size 7 genes
NF 0.23
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.93Os08g0517200AK058787.1-Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)1e-39At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)O.I.H.G.S.X.
0.3032.70.93Os10g0524400AK108768.1-Phospholipase D (EC 3.1.4.4)2e-19At4g11840PLDGAMMA3O.I.H.G.S.X.
0.2524.10.93Os02g0721800AK100043.1-Phosphatidylinositol transfer-like protein IV2e-9At1g75370SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putativeO.I.H.G.S.X.
0.2117.90.93Os07g0409900AF194414.2-Protein kinase domain containing protein6e-33At2g17890CPK16O.I.H.G.S.X.
0.1915.10.92Os06g0229200AK070606.1-Glycosyl transferase, family 31 protein7e-9At1g26810GALT1 (GALACTOSYLTRANSFERASE1)O.I.H.G.S.X.
0.1712.60.92Os07g0511000AK070461.1-Conserved hypothetical protein2e-2At5g55060unknown proteinO.I.H.G.S.X.
0.138.20.92Os02g0545000AK062923.1-Dilute domain containing protein1e+0At1g21900emp24/gp25L/p24 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.199.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.599.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1541GO:0046470The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes.Link to AmiGO
0.0691GO:0006486The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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