Co-expression analysis

Gene ID Os08g0511700
Gene name
Homology with ArabidopsisSimilar to At4g35470: leucine-rich repeat family protein (HF=2e-4)
Module size 12 genes
NF 0.15
%ile 12.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.70.92Os08g0511700AK065422.1-Leucine-rich repeat, typical subtype containingprotein2e-4At4g35470leucine-rich repeat family proteinO.I.H.G.S.X.
0.4051.10.94Os10g0488800AK102087.1-Myosin head, motor region domain containingprotein6e-53At1g50360VIIIAO.I.H.G.S.X.
0.2931.10.96Os04g0562000AK060894.1-Zn-finger, DHHC type domain containing protein5e-11At3g51390zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.2016.50.96Os07g0138100AK067870.1-Pleckstrin-like domain containing protein6e-5At2g30880pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.1813.70.95Os04g0510300AK105129.1-The start codon is not identified.6e-4At2g32700WD-40 repeat family proteinO.I.H.G.S.X.
0.1510.30.95Os03g0126100AK111921.1-C-terminal binding protein3e-46At1g01510AN (ANGUSTIFOLIA)O.I.H.G.S.X.
0.149.30.95Os04g0479100AK071348.1-Conserved hypothetical protein1e+0At3g55646unknown proteinO.I.H.G.S.X.
0.127.20.95Os10g0423000AK103624.1-Conserved hypothetical protein7e-2At4g08400proline-rich extensin-like family proteinO.I.H.G.S.X.
0.127.20.96Os12g0163400AK102298.1-Tubby family protein1e-6At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.116.50.96Os05g0149800AK058366.1-Calcium-binding EF-hand domain containing protein4e-77At5g18580FASS (FASS 1)O.I.H.G.S.X.
0.063.00.95Os11g0533500AK121431.1-Retinoblastoma-related protein 2b (Fragment)3e-2At3g12280RBR1 (RETINOBLASTOMA-RELATED 1)O.I.H.G.S.X.
0.063.00.96Os07g0673500AK072839.1--7e-11At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.498.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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