Co-expression analysis

Gene ID Os08g0484400
Gene name
Homology with ArabidopsisSimilar to At2g22400: NOL1/NOP2/sun family protein (HF=4e-10)
Module size 9 genes
NF 0.52
%ile 68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.40.97Os08g0484400AK065727.1-Bacterial Fmu (Sun)/eukaryotic nucleolarNOL1/Nop2p domain containing protein4e-10At2g22400NOL1/NOP2/sun family proteinO.I.H.G.S.X.
0.7088.40.97Os03g0849700AK111868.1-TPR-like domain containing protein1e-1At4g02750pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.5978.00.97Os04g0528400AK101159.1-Hus1-like protein family protein2e-8At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)O.I.H.G.S.X.
0.4660.90.97Os06g0132600AK061226.1-Conserved hypothetical protein4e-2At4g17760damaged DNA binding / exodeoxyribonuclease IIIO.I.H.G.S.X.
0.4660.90.97Os08g0520400AK064309.1-Conserved hypothetical protein2e+0At5g23940EMB3009 (embryo defective 3009)O.I.H.G.S.X.
0.4355.40.97Os07g0495300NM_187348.1-TPR-like domain containing protein4e+0At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4051.10.97Os05g0370000AK069708.1-TPR-like domain containing protein8e-2At2g37320pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3745.00.97Os10g0145100AK073677.1-Cyclin-like F-box domain containing protein2e-1At5g64690neurofilament triplet H protein-relatedO.I.H.G.S.X.
0.3541.70.97Os02g0772300AK071492.1-GCN5-related N-acetyltransferase domain containingprotein3e+0At5g49540unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.298.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.098.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM154959Leaf_OsRR6-overexpressor_replicate 1GSE6720Gene expression in OsRR6-overexpression lineLink to GEO
7.797.6GSM173093Rice OsSRT1 RNAi transgenic line LM2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in riceLink to GEO
7.097.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM254091Rice overexpressed OsSKIPa, biological repeat 1GSE10054Expression information of splicing factor OsSKIPa knock-down and overexpressed riceLink to GEO
6.797.3GSM173094Rice OsSRT1 RNAi transgenic line LM3GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in riceLink to GEO
6.597.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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