| Gene ID | Os08g0484400 |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g22400: NOL1/NOP2/sun family protein (HF=4e-10) |
| Module size | 9 genes |
| NF | 0.52 |
| %ile | 68.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.64 | 83.4 | 0.97 | Os08g0484400 | AK065727.1 | - | Bacterial Fmu (Sun)/eukaryotic nucleolarNOL1/Nop2p domain containing protein | 4e-10 | At2g22400 | NOL1/NOP2/sun family protein | O.I. | H.G. | S.X. | |
| 0.70 | 88.4 | 0.97 | Os03g0849700 | AK111868.1 | - | TPR-like domain containing protein | 1e-1 | At4g02750 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.59 | 78.0 | 0.97 | Os04g0528400 | AK101159.1 | - | Hus1-like protein family protein | 2e-8 | At1g17840 | WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.97 | Os06g0132600 | AK061226.1 | - | Conserved hypothetical protein | 4e-2 | At4g17760 | damaged DNA binding / exodeoxyribonuclease III | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.97 | Os08g0520400 | AK064309.1 | - | Conserved hypothetical protein | 2e+0 | At5g23940 | EMB3009 (embryo defective 3009) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.97 | Os07g0495300 | NM_187348.1 | - | TPR-like domain containing protein | 4e+0 | At5g17480 | APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.97 | Os05g0370000 | AK069708.1 | - | TPR-like domain containing protein | 8e-2 | At2g37320 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | 0.97 | Os10g0145100 | AK073677.1 | - | Cyclin-like F-box domain containing protein | 2e-1 | At5g64690 | neurofilament triplet H protein-related | O.I. | H.G. | S.X. | |
| 0.35 | 41.7 | 0.97 | Os02g0772300 | AK071492.1 | - | GCN5-related N-acetyltransferase domain containingprotein | 3e+0 | At5g49540 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 14.2 | 98.5 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 11.0 | 98.2 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 8.6 | 97.8 | GSM154959 | Leaf_OsRR6-overexpressor_replicate 1 | GSE6720 | Gene expression in OsRR6-overexpression line | |
| 7.7 | 97.6 | GSM173093 | Rice OsSRT1 RNAi transgenic line LM2 | GSE7197 | Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice | |
| 7.0 | 97.4 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.9 | 97.3 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.8 | 97.3 | GSM254091 | Rice overexpressed OsSKIPa, biological repeat 1 | GSE10054 | Expression information of splicing factor OsSKIPa knock-down and overexpressed rice | |
| 6.7 | 97.3 | GSM173094 | Rice OsSRT1 RNAi transgenic line LM3 | GSE7197 | Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice | |
| 6.5 | 97.2 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.4 | 97.2 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage