Co-expression analysis

Gene ID Os08g0478100
Gene name
Homology with ArabidopsisSimilar to At4g38090: unknown protein (HF=2e-4)
Module size 7 genes
NF 0.41
%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4863.70.92Os08g0478100AK063259.1-Protein of unknown function UPF0029 family protein2e-4At4g38090unknown proteinO.I.H.G.S.X.
0.4458.10.94Os12g0193100AK068584.1-Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)]6e-1At3g61840unknown proteinO.I.H.G.S.X.
0.4458.10.96Os04g0278900AK108886.1-Dihydrouridine synthase, DuS family protein2e-3At3g63510FAD binding / catalytic/ tRNA dihydrouridine synthaseO.I.H.G.S.X.
0.4051.10.94Os01g07042009629.m04922-Conserved hypothetical protein9e-12At5g63040unknown proteinO.I.H.G.S.X.
0.3948.30.94Os09g0248000AK120327.1-Conserved hypothetical protein1e-7At2g03800GEK1 (GEKO1)O.I.H.G.S.X.
0.3541.70.94Os12g0103000AK068622.1-Mitochondrial substrate carrier family protein3e-16At2g35800mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2727.50.93Os01g0796500CA766130-HAD-superfamily, subfamily IIIA phosphatase domaincontaining protein8e-1At3g22090unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.497.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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