| Gene ID | Os08g0474700 |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g21630: transport protein, putative (HF=1e-13) |
| Module size | 6 genes |
| NF | 0.59 |
| %ile | 79.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | 0.97 | Os08g0474700 | AK064878.1 | - | - | 1e-13 | At2g21630 | transport protein, putative | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | 0.98 | Os04g0440100 | AK105415.1 | - | Nonsense-mediated decay UPF3 domain containingprotein | 2e-9 | At1g33980 | Smg-4/UPF3 family protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.98 | Os06g0208300 | AK059092.1 | - | Translation protein SH3-like domain containingprotein | 2e-8 | At2g34210 | structural constituent of ribosome / transcription elongation regulator/ transcription initiation factor | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.98 | Os07g0495900 | AK060293.1 | - | Regulator of nonsense transcripts 1 homolog | 1e-6 | At5g47010 | LBA1 (LOW-LEVEL BETA-AMYLASE 1) | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | 0.97 | Os06g0644500 | AK101292.1 | - | - | 1e-28 | At5g20350 | TIP1 (TIP GROWTH DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.97 | Os03g0223700 | AK068416.1 | - | ARM repeat fold domain containing protein | 2e-49 | At2g01690 | binding | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 18.3 | 98.9 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 17.1 | 98.8 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 14.8 | 98.6 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 14.1 | 98.5 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 14.0 | 98.5 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 13.7 | 98.5 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 13.1 | 98.4 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 13.1 | 98.4 | GSM377086 | Genomic DNA - 45 day old leaf sample - IR64 wtcheck | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 13.0 | 98.4 | GSM377072 | Genomic DNA - 45 day old leaf sample - mutant d1137 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 12.9 | 98.4 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.200 | 1 | GO:0009307 | Any process that protect an organism from invading foreign DNA by methylation of self DNA at specific sequences and nucleolytic cleavage of unmethylated foreign DNA. |  |
| 0.154 | 1 | GO:0006888 | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. | |
| 0.020 | 1 | GO:0006886 | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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