Co-expression analysis

Gene ID Os08g0473900
Gene name
Homology with ArabidopsisSimilar to At4g24640: APPB1 (HF=3e+0)
Module size 6 genes
NF 0.77
%ile 97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5777.00.77Os08g0473900M24287.1--3e+0At4g24640APPB1O.I.H.G.S.X.
0.8395.80.82Os08g0136300AK059618.1-Protein of unknown function DUF26 domaincontaining protein1e-1At4g24026unknown proteinO.I.H.G.S.X.
0.8094.60.85Os11g0702100AK102505.1-Class III chitinase homologue (OsChib3H-h)(Fragment)6e-1At1g64628CPuORF57 (Conserved peptide upstream open reading frame 57)O.I.H.G.S.X.
0.7391.10.82Os11g0702200AK101155.1-Glycoside hydrolase, family 18 protein2e+0At2g38480integral membrane protein, putativeO.I.H.G.S.X.
0.7391.10.87Os08g0518900D55709.1-Glycoside hydrolase, family 18 protein2e-1At5g03830-O.I.H.G.S.X.
0.6181.20.82Os11g0701500AK058882.1-Class III chitinase homologue (OsChib3H-g)(Fragment)2e+0At3g10525-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.699.9GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
23.399.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.499.3GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
15.998.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.798.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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