Co-expression analysis

Gene ID Os08g0473800
Gene name
Homology with ArabidopsisSimilar to At4g25000: AMY1 (ALPHA-AMYLASE-LIKE) (HF=3e-3)
Module size 6 genes
NF 0.58
%ile 79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os08g0473800AK064124.1-Conserved hypothetical protein3e-3At4g25000AMY1 (ALPHA-AMYLASE-LIKE)O.I.H.G.S.X.
0.6787.20.99Os06g01621009634.m00598-Protein of unknown function DUF569 family protein2e+0At3g02000ROXY1O.I.H.G.S.X.
0.5573.70.99Os02g05460509630.m03255--1e+1At4g28750PSAE-1 (PSA E1 KNOCKOUT)O.I.H.G.S.X.
0.5068.00.99Os05g02499009633.m01433-Conserved hypothetical protein4e-2At3g23255unknown proteinO.I.H.G.S.X.
0.4458.10.98Os11g0158300AK070475.1-Protein prenyltransferase domain containingprotein1e+0At5g14850mannosyltransferase, putativeO.I.H.G.S.X.
0.2931.10.99Os02g02455009630.m01382--8e-2At5g19090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
64.599.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
25.599.5GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
19.799.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.799.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.499.0GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
17.098.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.398.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.298.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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