Co-expression analysis

Gene ID Os08g0463400
Gene name
Homology with ArabidopsisSimilar to At5g37720: RNA and export factor-binding protein, putative (HF=1e-1)
Module size 6 genes
NF 0.15
%ile 12.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os08g04634009636.m03632--1e-1At5g37720RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.1712.60.98Os01g06595509629.m04504--2e+0At2g47890zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.127.20.98Os12g0565800AK072828.1-The stop codon is not identified.3e-4At4g10200hAT dimerisation domain-containing protein / transposase-relatedO.I.H.G.S.X.
0.105.70.98Os01g08267009629.m06011--2e+0At5g39580peroxidase, putativeO.I.H.G.S.X.
0.105.70.98Os04g01610009632.m00701--9e-1At5g67010AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.094.90.98Os06g04798009634.m02732--3e+0At5g37415sequence-specific DNA binding / transcription factorO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
86.0100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.499.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.398.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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