Co-expression analysis

Gene ID Os08g0459600
Gene name
Homology with ArabidopsisSimilar to At2g06050: OPR3 (OPDA-REDUCTASE 3) (HF=2e-7)
Module size 10 genes
NF 0.33
%ile 36.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.40.95Os08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.7591.90.96Os02g0797600AK120644.1-Conserved hypothetical protein8e-5At2g15270unknown proteinO.I.H.G.S.X.
0.4458.10.96Os03g0275500AK060774.1-Epsin, N-terminal domain containing protein1e-3At2g25430epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.4355.40.96Os05g0498400AK058219.1-Translation initiation factor SUI1 family protein7e-15At5g54760eukaryotic translation initiation factor SUI1, putativeO.I.H.G.S.X.
0.3644.00.96Os08g0175200AK072367.1-Eukaryotic protein of unknown function DUF292domain containing protein1e-3At1g34220unknown proteinO.I.H.G.S.X.
0.3338.80.95Os06g0643300AY224520.1-Superal13e-24At1g73030VPS46.2O.I.H.G.S.X.
0.2727.50.97Os05g0135800AK066258.1-Pto kinase interactor 12e-66At3g62220serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2321.20.96Os12g0514400CB660276-Potyvirus VPg interacting protein (Fragment)9e-3At5g48160OBE2 (OBERON2)O.I.H.G.S.X.
0.2321.20.96Os02g0822400AK062258.1-No apical meristem (NAM) protein domain containingprotein5e-3At5g09330anac082 (Arabidopsis NAC domain containing protein 82)O.I.H.G.S.X.
0.1712.60.96Os01g0930400BI812278-K+ potassium transporter family protein4e-7At4g13420HAK5 (HIGH AFFINITY K+ TRANSPORTER 5)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.799.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.097.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
5.596.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0541GO:0006413The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.Link to AmiGO
0.0511GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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