Co-expression analysis

Gene ID Os08g0408500
Gene name
Homology with ArabidopsisSimilar to At1g53170: ERF8 (HF=2e-1)
Module size 10 genes
NF 0.06
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.89Os08g0408500AK068312.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-1At1g53170ERF8O.I.H.G.S.X.
0.3134.50.86Os09g0478600AK109529.1-The start codon is not identified.5e+0At3g06890unknown proteinO.I.H.G.S.X.
0.094.90.94Os02g0797600AK120644.1-Conserved hypothetical protein8e-5At2g15270unknown proteinO.I.H.G.S.X.
0.073.70.94Os01g0248400AK072762.1-NADP-dependent isocitrate dehydrogenase2e-38At1g54340ICDH (ISOCITRATE DEHYDROGENASE)O.I.H.G.S.X.
0.063.00.91Os03g0146000AK061250.1-RAB1X3e-9At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)O.I.H.G.S.X.
0.052.50.93Os03g0322800AK101817.1-Engulfment and cell motility, ELM domaincontaining protein1e-2At1g03620phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.031.40.89Os02g0730300AK111629.1-Potassium transporter 8 (AtPOT8) (AtHAK8)3e-26At1g70300KUP6O.I.H.G.S.X.
0.031.40.92Os09g0369000AK070758.1-AP2 domain transcription factor RAP2.3 (Related toAP2 protein 3) (Cadmium-induced protein AS30)3e-4At1g71130AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.031.40.94Os05g0494500AK071846.1-Conserved hypothetical protein1e-14At2g25520phosphate translocator-relatedO.I.H.G.S.X.
0.021.00.95Os06g0247800AK102187.1-Dynamin-like protein (Fragment)2e-30At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.797.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1181GO:0044262The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.Link to AmiGO
0.0511GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO
0.0341GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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