Co-expression analysis

Gene ID Os08g0406400
Gene name
Homology with ArabidopsisSimilar to At1g78000: SULTR1 (HF=6e-4)
Module size 41 genes
NF 0.42
%ile 51.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.90Os08g0406400AK062031.1-Sulfate transporter (Fragment)6e-4At1g78000SULTR1O.I.H.G.S.X.
0.5777.00.95Os06g0725900AK065019.1-Cell division protein ftsH homolog, chloroplastprecursor (EC 3.4.24.-) (DS9)7e-144At1g50250FTSH1 (FtsH protease 1)O.I.H.G.S.X.
0.5676.30.93Os05g0549100AK072422.1-Casein kinase II, alpha' chain (CK II) (EC2.7.1.37)1e-27At1g68830STN7 (Stt7 homolog STN7)O.I.H.G.S.X.
0.5471.90.95Os03g0731900AK064873.1-Isopentenyl/dimethylallyl diphosphate synthase(Fragment)8e-23At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.5371.30.92Os05g0323800AK101553.1-ABC-1 domain containing protein3e-28At1g79600ABC1 family proteinO.I.H.G.S.X.
0.5269.60.95Os06g0669400AK064913.1--4e-90At1g06430FTSH8O.I.H.G.S.X.
0.5269.60.93Os06g0724400AK099961.1-DNL zinc finger domain containing protein2e+0At5g27280zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.4964.40.93Os04g0493000AB001883.1-Zn-finger, CONSTANS type domain containing protein2e-6At1g06040STO (SALT TOLERANCE)O.I.H.G.S.X.
0.4964.40.93Os01g0830000AK121100.1-SufB7e-5At4g04770ATABC1 (ATP BINDING CASSETTE PROTEIN 1)O.I.H.G.S.X.
0.4762.30.95Os01g0711400AY495085.1-Victorin binding protein3e-75At4g33010AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)O.I.H.G.S.X.
0.4762.30.92Os02g0603800AK120769.1-Isoprenoid biosynthesis-like protein (Fragment)6e-86At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.4660.90.92Os08g0547900AK103567.1-Cytochrome P450 family protein6e-2At5g44620CYP706A3O.I.H.G.S.X.
0.4660.90.94Os01g0120500AK070131.1-Conserved hypothetical protein1e-1At1g18060unknown proteinO.I.H.G.S.X.
0.4458.10.94Os02g0506600CB679096-Conserved hypothetical protein4e-1At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4355.40.91Os04g0321800AK069106.1-Protein phosphatase 2C-like domain containingprotein1e-15At5g36250protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4253.90.92Os09g0133600AK104742.1-Fibrillin-like protein1e-4At4g04020FIB (FIBRILLIN)O.I.H.G.S.X.
0.4152.40.94Os02g0529400AK121301.1-Plant neutral invertase family protein3e-38At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.4051.10.93Os08g0558200AK069761.1--8e-13At5g03880electron carrierO.I.H.G.S.X.
0.4051.10.94Os02g0567100AK066393.1-Thioredoxin-related domain containing protein7e+0At5g28820unknown proteinO.I.H.G.S.X.
0.4051.10.95Os06g0638200AK059450.1--3e-8At1g21065unknown proteinO.I.H.G.S.X.
0.4051.10.95Os05g0568900AK120626.1-Protease Do-like 1, chloroplast precursor (EC3.4.21.-)7e-60At3g27925DEGP1 (DegP protease 1)O.I.H.G.S.X.
0.3948.30.92Os03g0607500AK059397.1-Hypothetical protein1e-3At2g14910unknown proteinO.I.H.G.S.X.
0.3948.30.94Os04g0304200AB018443.1-Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)(Phototropin)6e-31At5g58140PHOT2 (PHOTOTROPIN 2)O.I.H.G.S.X.
0.3948.30.96Os03g0131200AY339372.1-Catalase isozyme 2 (EC 1.11.1.6)2e-45At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.3948.30.91Os05g0137300AK067812.1-Conserved hypothetical protein7e-1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.3948.30.96Os03g0773800AK104821.1-Malate dehydrogenase, glyoxysomal precursor (EC1.1.1.37) (mbNAD-MDH)2e-38At5g09660PMDH2 (peroxisomal NAD-malate dehydrogenase 2)O.I.H.G.S.X.
0.3745.00.90Os06g0597900AK065544.1--3e-6At5g20140SOUL heme-binding family proteinO.I.H.G.S.X.
0.3745.00.95Os01g0913000AF022741.1--2e-6At5g16400ATF2O.I.H.G.S.X.
0.3745.00.95Os02g0157700BI805581-GTP-binding protein LepA family protein2e-18At5g08650GTP-binding protein LepA, putativeO.I.H.G.S.X.
0.3644.00.94Os06g0245800AK066714.1-Alanyl-transfer RNA synthetase family protein5e-22At5g22800EMB1030 (EMBRYO DEFECTIVE 1030)O.I.H.G.S.X.
0.3644.00.95Os02g0707100AK065585.1-Monodehydroascorbate reductase, seedling isozyme(EC 1.6.5.4) (MDAR seedling) (Ascorbate free radicalreductase seedling) (AFR reductase seedling)6e-5At3g27820MDAR4 (MONODEHYDROASCORBATE REDUCTASE 4)O.I.H.G.S.X.
0.3541.70.95Os08g0359000AK066474.1-Conserved hypothetical protein2e-4At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.H.G.S.X.
0.3440.00.95Os04g0448600AK068709.1-ChaC-like protein family protein2e-3At1g44790ChaC-like family proteinO.I.H.G.S.X.
0.3440.00.91Os09g0250700AK120335.1-ABC-1 domain containing protein4e-19At3g07700ABC1 family proteinO.I.H.G.S.X.
0.3440.00.92Os03g0729200AK059020.1-Conserved hypothetical protein6e-1At5g65840-O.I.H.G.S.X.
0.3440.00.93Os04g0640500AK070519.1-ABC-1 domain containing protein9e-5At1g71810ABC1 family proteinO.I.H.G.S.X.
0.3338.80.95Os07g0658400AK120896.1-Ferredoxin-dependent glutamate synthase,chloroplast (EC 1.4.7.1) (Fd- GOGAT)8e-81At5g04140GLU1 (GLUTAMATE SYNTHASE 1)O.I.H.G.S.X.
0.3236.30.96Os01g0151200AK110801.1-Inner membrane protein ALBINO3, chloroplastprecursor. Splice isoform 21e-37At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.
0.3134.50.94Os02g0643500AK068423.1-Pentapeptide repeat containing protein6e-13At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.3032.70.95Os03g0169100AK099215.1-Ribulose-phosphate 3-epimerase, chloroplastprecursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase)(PPE) (RPE) (R5P3E)6e-66At5g61410RPEO.I.H.G.S.X.
0.2931.10.94Os07g0108300AK060835.1-Alanine aminotransferase4e-22At1g23310GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.298.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.698.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.898.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.898.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0782GO:0016114The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.Link to AmiGO
0.0481GO:0019288The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.Link to AmiGO
0.0481GO:0051205The process by which a protein is incorporated into a biological membrane.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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