Co-expression analysis

Gene ID Os08g0371300
Gene name
Homology with ArabidopsisSimilar to At3g01100: HYP1 (HYPOTHETICAL PROTEIN 1) (HF=4e+0)
Module size 9 genes
NF 0.08
%ile 5.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.97Os08g03713009636.m02806--4e+0At3g01100HYP1 (HYPOTHETICAL PROTEIN 1)O.I.H.G.S.X.
0.127.20.98Os05g02449009633.m01381--7e+0At4g34270TIP41-like family proteinO.I.H.G.S.X.
0.116.50.98Os04g03246009632.m02320--8e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.H.G.S.X.
0.105.70.98Os04g05590009632.m04551-Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein5e-3At3g14067subtilase family proteinO.I.H.G.S.X.
0.105.70.98Os03g0681100NM_184872.1--2e+0At4g28990RNA-binding protein-relatedO.I.H.G.S.X.
0.094.90.98Os10g01334009638.m00349--8e+0At2g15830unknown proteinO.I.H.G.S.X.
0.063.00.98Os04g03538009632.m02695--3e-2At4g37980ELI3-1 (ELICITOR-ACTIVATED GENE 3-1)O.I.H.G.S.X.
0.042.00.98Os01g0277100AK062999.1-Hypothetical protein2e+0At4g14010RALFL32 (ralf-like 32)O.I.H.G.S.X.
0.042.00.98Os07g0109100AU222580-Protein of unknown function DUF594 family protein1e+0At5g23750remorin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.899.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.498.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.498.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0451GO:0006350The synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO
0.0151GO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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