Co-expression analysis

Gene ID Os08g0371200
Gene name
Homology with ArabidopsisSimilar to At5g57000: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.14
%ile 11.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.82Os08g0371200AK120474.1-Conserved hypothetical protein5e+0At5g57000unknown proteinO.I.H.G.S.X.
0.4051.10.94Os04g0379700AF288196.3-Violaxanthin de-epoxidase precursor7e-17At1g08550NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)O.I.H.G.S.X.
0.3644.00.92Os05g0241200AK073395.1-Triose phosphate/phosphate translocator,chloroplast precursor (CTPT)8e-7At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)O.I.H.G.S.X.
0.127.20.92Os03g0126300AY346336.1-SAM (and some other nucleotide) binding motifdomain containing protein3e-2At1g75550glycine-rich proteinO.I.H.G.S.X.
0.063.00.90Os07g0693800AK061531.1-Omega-3 fatty acid desaturase, chloroplastprecursor (EC 1.14.19.-)2e-17At5g05580FAD8 (FATTY ACID DESATURASE 8)O.I.H.G.S.X.
0.042.00.93Os04g0658300AK067399.1-AAA ATPase, central region domain containingprotein1e-30At1g73110ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.298.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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